Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 SCARNA20.5-201ENST00000516991 142 ntBASIC15.91■□□□□ 0.14
NCKAP1LP55160 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 AC244452.3-201ENST00000636814 210 ntBASIC15.91■□□□□ 0.14
NCKAP1LP55160 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 AC016397.2-201ENST00000624848 1985 ntBASIC15.91■□□□□ 0.14
NCKAP1LP55160 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCKAP1LP55160 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.91■□□□□ 0.14
NCKAP1LP55160 PCDHA3-202ENST00000532566 4594 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 AL022313.4-201ENST00000562756 2046 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 AKR7A2P1-201ENST00000460134 915 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 MIR6787-201ENST00000616675 61 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 AL591471.1-201ENST00000621855 229 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCKAP1LP55160 TUBBP5-203ENST00000508529 1334 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.9■□□□□ 0.14
NCKAP1LP55160 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.9■□□□□ 0.14
NCKAP1LP55160 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
NCKAP1LP55160 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NCKAP1LP55160 AP002353.1-201ENST00000528257 1599 ntBASIC15.89■□□□□ 0.13
NCKAP1LP55160 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NCKAP1LP55160 RN7SKP214-201ENST00000364208 315 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms