Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
LIMK2P53671 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK2P53671 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK2P53671 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 TMEM198B-204ENST00000484016 896 ntBASIC14.76□□□□□ -0.05
LIMK2P53671 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 AC091271.1-201ENST00000611877 1162 ntBASIC14.76□□□□□ -0.05
LIMK2P53671 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK2P53671 AC006453.4-201ENST00000636949 1252 ntBASIC14.76□□□□□ -0.05
LIMK2P53671 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LIMK2P53671 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LIMK2P53671 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.76□□□□□ -0.05
LIMK2P53671 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LIMK2P53671 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LIMK2P53671 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.75□□□□□ -0.05
LIMK2P53671 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LIMK2P53671 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.75□□□□□ -0.05
LIMK2P53671 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
LIMK2P53671 MESTP3-201ENST00000503460 968 ntBASIC14.75□□□□□ -0.05
LIMK2P53671 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.75□□□□□ -0.05
LIMK2P53671 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LIMK2P53671 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 FAM86HP-204ENST00000513466 959 ntBASIC14.75□□□□□ -0.05
LIMK2P53671 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.75□□□□□ -0.05
LIMK2P53671 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.75□□□□□ -0.05
LIMK2P53671 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.75□□□□□ -0.05
LIMK2P53671 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.75□□□□□ -0.05
LIMK2P53671 AC244093.1-201ENST00000610837 814 ntBASIC14.75□□□□□ -0.05
LIMK2P53671 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.75□□□□□ -0.05
LIMK2P53671 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 AC139712.1-201ENST00000378256 1875 ntBASIC14.75□□□□□ -0.05
LIMK2P53671 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.75□□□□□ -0.05
LIMK2P53671 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
LIMK2P53671 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LIMK2P53671 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms