Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
GTF2A2P52657 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 ACE3P-201ENST00000423435 1973 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 AC067931.2-201ENST00000623655 2003 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GTF2A2P52657 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GTF2A2P52657 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GTF2A2P52657 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 BPIFB5P-201ENST00000457066 1099 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.59■□□□□ 0.25
GTF2A2P52657 RN7SL375P-201ENST00000492442 298 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 ALG1L3P-201ENST00000503331 765 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 AC106047.2-201ENST00000511723 743 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 VENTXP3-201ENST00000546480 773 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 CASP16P-204ENST00000635032 809 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 AL109809.1-201ENST00000418979 1367 ntBASIC16.59■□□□□ 0.25
GTF2A2P52657 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GTF2A2P52657 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.59■□□□□ 0.25
GTF2A2P52657 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GTF2A2P52657 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.58■□□□□ 0.25
GTF2A2P52657 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GTF2A2P52657 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.58■□□□□ 0.25
GTF2A2P52657 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.58■□□□□ 0.25
GTF2A2P52657 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
GTF2A2P52657 AC011270.2-201ENST00000624293 2550 ntBASIC16.58■□□□□ 0.25
GTF2A2P52657 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GTF2A2P52657 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
GTF2A2P52657 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.58■□□□□ 0.25
GTF2A2P52657 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AP000354.1-201ENST00000396982 456 ntBASIC16.58■□□□□ 0.24
GTF2A2P52657 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.58■□□□□ 0.24
GTF2A2P52657 BX679664.3-201ENST00000414070 555 ntBASIC16.58■□□□□ 0.24
GTF2A2P52657 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.58■□□□□ 0.24
GTF2A2P52657 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.58■□□□□ 0.24
GTF2A2P52657 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC006529.1-201ENST00000459978 637 ntBASIC16.58■□□□□ 0.24
GTF2A2P52657 AC113935.1-201ENST00000471722 555 ntBASIC16.58■□□□□ 0.24
GTF2A2P52657 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.58■□□□□ 0.24
GTF2A2P52657 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.58■□□□□ 0.24
GTF2A2P52657 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.58■□□□□ 0.24
GTF2A2P52657 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC068831.5-201ENST00000557387 328 ntBASIC16.58■□□□□ 0.24
GTF2A2P52657 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GTF2A2P52657 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.58■□□□□ 0.24
GTF2A2P52657 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.58■□□□□ 0.24
GTF2A2P52657 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.58■□□□□ 0.24
GTF2A2P52657 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
GTF2A2P52657 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.58■□□□□ 0.24
GTF2A2P52657 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GTF2A2P52657 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A2P52657 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A2P52657 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.57■□□□□ 0.24
GTF2A2P52657 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
GTF2A2P52657 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.57■□□□□ 0.24
GTF2A2P52657 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.57■□□□□ 0.24
GTF2A2P52657 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A2P52657 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A2P52657 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms