Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF144AP50876 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF144AP50876 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RNF144AP50876 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RNF144AP50876 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF144AP50876 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.68□□□□□ -0.22
RNF144AP50876 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 SEC63P1-201ENST00000425785 1258 ntBASIC13.68□□□□□ -0.22
RNF144AP50876 AC005034.1-201ENST00000426657 489 ntBASIC13.68□□□□□ -0.22
RNF144AP50876 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF144AP50876 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
RNF144AP50876 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.68□□□□□ -0.22
RNF144AP50876 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF144AP50876 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF144AP50876 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 CICP16-201ENST00000502609 2813 ntBASIC13.68□□□□□ -0.22
RNF144AP50876 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RNF144AP50876 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RNF144AP50876 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 AL354989.2-201ENST00000435838 1540 ntBASIC13.68□□□□□ -0.22
RNF144AP50876 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 AGGF1P1-201ENST00000509500 2073 ntBASIC13.68□□□□□ -0.22
RNF144AP50876 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RNF144AP50876 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
RNF144AP50876 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF144AP50876 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RNF144AP50876 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 AC010327.5-201ENST00000586923 3061 ntBASIC13.67□□□□□ -0.22
RNF144AP50876 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF144AP50876 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
RNF144AP50876 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF144AP50876 MIR1202-201ENST00000408529 83 ntBASIC13.67□□□□□ -0.22
RNF144AP50876 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF144AP50876 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms