Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC093106.1-201ENST00000437271 352 ntBASIC15.8■□□□□ 0.12
HTTP42858 CDKN2A-AS1-201ENST00000441769 823 ntBASIC15.8■□□□□ 0.12
HTTP42858 BAK1P2-201ENST00000532665 631 ntBASIC15.8■□□□□ 0.12
HTTP42858 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.8■□□□□ 0.12
HTTP42858 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC15.8■□□□□ 0.12
HTTP42858 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC15.8■□□□□ 0.12
HTTP42858 AL591471.1-201ENST00000621855 229 ntBASIC15.8■□□□□ 0.12
HTTP42858 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.8■□□□□ 0.12
HTTP42858 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.8■□□□□ 0.12
HTTP42858 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HTTP42858 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 RBP4-203ENST00000371469 814 ntTSL 5 BASIC15.79■□□□□ 0.12
HTTP42858 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 SPTLC1P3-201ENST00000403408 259 ntBASIC15.79■□□□□ 0.12
HTTP42858 AC026884.1-201ENST00000418296 457 ntBASIC15.79■□□□□ 0.12
HTTP42858 CCND3P1-201ENST00000438347 580 ntBASIC15.79■□□□□ 0.12
HTTP42858 FAM86JP-202ENST00000484500 988 ntBASIC15.79■□□□□ 0.12
HTTP42858 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 SRPK2P-201ENST00000523408 1100 ntBASIC15.79■□□□□ 0.12
HTTP42858 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.79■□□□□ 0.12
HTTP42858 AC048382.6-201ENST00000621980 1223 ntBASIC15.79■□□□□ 0.12
HTTP42858 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.79■□□□□ 0.12
HTTP42858 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 RN7SL605P-201ENST00000577229 281 ntBASIC15.79■□□□□ 0.12
HTTP42858 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 AL590556.2-202ENST00000636906 844 ntBASIC15.79■□□□□ 0.12
HTTP42858 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 AL121753.2-201ENST00000624581 1461 ntBASIC15.79■□□□□ 0.12
HTTP42858 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HTTP42858 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HTTP42858 AL627095.1-201ENST00000414775 321 ntBASIC15.79■□□□□ 0.12
HTTP42858 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
HTTP42858 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC15.79■□□□□ 0.12
HTTP42858 BX322562.1-201ENST00000617004 561 ntBASIC15.79■□□□□ 0.12
HTTP42858 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTTP42858 KRT8P38-201ENST00000441370 1430 ntBASIC15.78■□□□□ 0.12
HTTP42858 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HTTP42858 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.78■□□□□ 0.12
HTTP42858 Z98885.3-201ENST00000624882 1757 ntBASIC15.78■□□□□ 0.12
HTTP42858 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HTTP42858 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HTTP42858 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.78■□□□□ 0.12
HTTP42858 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC15.78■□□□□ 0.12
HTTP42858 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC15.78■□□□□ 0.12
HTTP42858 CCND3P2-201ENST00000579393 537 ntBASIC15.78■□□□□ 0.12
HTTP42858 MIR4640-201ENST00000581824 90 ntBASIC15.78■□□□□ 0.12
HTTP42858 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC15.78■□□□□ 0.12
HTTP42858 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.78■□□□□ 0.12
HTTP42858 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
HTTP42858 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 GOLGA2P8-201ENST00000505201 779 ntBASIC15.78■□□□□ 0.12
HTTP42858 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC15.78■□□□□ 0.12
HTTP42858 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC15.78■□□□□ 0.12
HTTP42858 AL049840.2-201ENST00000602722 535 ntBASIC15.78■□□□□ 0.12
HTTP42858 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC15.78■□□□□ 0.12
HTTP42858 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC15.78■□□□□ 0.12
HTTP42858 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HTTP42858 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTTP42858 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms