Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.5□□□□□ -0.09
HMGCLP35914 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCLP35914 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCLP35914 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HMGCLP35914 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGCLP35914 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HMGCLP35914 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 FAM86MP-201ENST00000340703 885 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HMGCLP35914 KRT18P36-201ENST00000411618 1276 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCLP35914 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGCLP35914 AC106794.1-201ENST00000506935 792 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCLP35914 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCLP35914 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCLP35914 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGCLP35914 SNORD3B-2-202ENST00000571722 791 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCLP35914 AC021016.3-201ENST00000608367 477 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 MIR6869-201ENST00000619434 62 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCLP35914 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGCLP35914 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 TCAM1P-207ENST00000485295 1537 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCLP35914 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 LAP3P2-201ENST00000454686 1454 ntBASIC14.49□□□□□ -0.09
HMGCLP35914 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HMGCLP35914 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGCLP35914 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCLP35914 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
HMGCLP35914 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGCLP35914 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.48□□□□□ -0.09
HMGCLP35914 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.48□□□□□ -0.09
HMGCLP35914 XBP1P1-201ENST00000436573 652 ntBASIC14.48□□□□□ -0.09
HMGCLP35914 AC007274.1-201ENST00000439805 662 ntBASIC14.48□□□□□ -0.09
HMGCLP35914 AC092658.1-201ENST00000505836 891 ntBASIC14.48□□□□□ -0.09
HMGCLP35914 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 AC005740.2-201ENST00000511085 419 ntBASIC14.48□□□□□ -0.09
HMGCLP35914 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.48□□□□□ -0.09
HMGCLP35914 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.48□□□□□ -0.09
HMGCLP35914 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.48□□□□□ -0.09
HMGCLP35914 AL118558.3-201ENST00000607414 1079 ntBASIC14.48□□□□□ -0.09
HMGCLP35914 AL022328.3-201ENST00000607943 679 ntBASIC14.48□□□□□ -0.09
HMGCLP35914 AC090386.2-201ENST00000623010 1039 ntBASIC14.48□□□□□ -0.09
HMGCLP35914 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.48□□□□□ -0.09
HMGCLP35914 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HMGCLP35914 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HMGCLP35914 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HMGCLP35914 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms