Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
HOXA6P31267 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.17□□□□□ -0.14
HOXA6P31267 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.17□□□□□ -0.14
HOXA6P31267 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA6P31267 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA6P31267 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HOXA6P31267 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA6P31267 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HOXA6P31267 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA6P31267 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
HOXA6P31267 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HOXA6P31267 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HOXA6P31267 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 KRT8P18-201ENST00000413425 1445 ntBASIC14.16□□□□□ -0.14
HOXA6P31267 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 AC073210.1-201ENST00000414799 232 ntBASIC14.16□□□□□ -0.14
HOXA6P31267 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.16□□□□□ -0.14
HOXA6P31267 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.16□□□□□ -0.14
HOXA6P31267 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.16□□□□□ -0.14
HOXA6P31267 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.16□□□□□ -0.14
HOXA6P31267 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.16□□□□□ -0.14
HOXA6P31267 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HOXA6P31267 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HOXA6P31267 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA6P31267 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA6P31267 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA6P31267 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HOXA6P31267 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.15□□□□□ -0.14
HOXA6P31267 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.15□□□□□ -0.14
HOXA6P31267 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA6P31267 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA6P31267 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HOXA6P31267 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HOXA6P31267 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HOXA6P31267 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.15□□□□□ -0.14
HOXA6P31267 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXA6P31267 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.15□□□□□ -0.14
HOXA6P31267 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HOXA6P31267 EEF1GP8-201ENST00000506566 1154 ntBASIC14.15□□□□□ -0.14
HOXA6P31267 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXA6P31267 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
HOXA6P31267 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXA6P31267 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.15□□□□□ -0.14
HOXA6P31267 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.15□□□□□ -0.14
HOXA6P31267 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
HOXA6P31267 AC018846.1-201ENST00000568231 183 ntBASIC14.15□□□□□ -0.14
HOXA6P31267 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms