Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
ATP2B1P20020 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 OR8S1-201ENST00000310194 1080 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2B1P20020 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 AC004945.1-201ENST00000416738 983 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2B1P20020 AC026954.1-201ENST00000429771 1293 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 RPL7P3-201ENST00000441388 714 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 KLF2P4-201ENST00000451959 1225 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 ACA64.2-201ENST00000459014 129 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.91■□□□□ 0.3
ATP2B1P20020 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP2B1P20020 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.91■□□□□ 0.3
ATP2B1P20020 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 SNX29P1-201ENST00000548357 1007 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 AC073413.1-201ENST00000603927 732 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 AC002472.3-201ENST00000640124 621 ntBASIC16.91■□□□□ 0.3
ATP2B1P20020 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP2B1P20020 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP2B1P20020 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP2B1P20020 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2B1P20020 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2B1P20020 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 AC006001.1-201ENST00000325130 474 ntBASIC16.9■□□□□ 0.3
ATP2B1P20020 ANKRD19P-201ENST00000338192 862 ntBASIC16.9■□□□□ 0.3
ATP2B1P20020 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2B1P20020 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP2B1P20020 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2B1P20020 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2B1P20020 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2B1P20020 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2B1P20020 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ATP2B1P20020 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.9■□□□□ 0.3
ATP2B1P20020 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP2B1P20020 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP2B1P20020 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP2B1P20020 RHOXF1P1-202ENST00000635473 501 ntBASIC16.9■□□□□ 0.3
ATP2B1P20020 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP2B1P20020 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATP2B1P20020 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP2B1P20020 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP2B1P20020 AHCYP2-201ENST00000430630 1300 ntBASIC16.9■□□□□ 0.3
ATP2B1P20020 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP2B1P20020 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2B1P20020 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP2B1P20020 MYADML-201ENST00000474610 2147 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms