Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.27□□□□□ -0.44
CXCL3P19876 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
CXCL3P19876 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.27□□□□□ -0.44
CXCL3P19876 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.27□□□□□ -0.44
CXCL3P19876 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.27□□□□□ -0.44
CXCL3P19876 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.27□□□□□ -0.44
CXCL3P19876 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.27□□□□□ -0.44
CXCL3P19876 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL3P19876 AC015688.4-201ENST00000580780 1647 ntBASIC12.27□□□□□ -0.44
CXCL3P19876 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CXCL3P19876 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.27□□□□□ -0.45
CXCL3P19876 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CXCL3P19876 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.27□□□□□ -0.45
CXCL3P19876 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.27□□□□□ -0.45
CXCL3P19876 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.27□□□□□ -0.45
CXCL3P19876 RARRES2P8-201ENST00000566335 367 ntBASIC12.27□□□□□ -0.45
CXCL3P19876 Z83851.2-201ENST00000609564 659 ntBASIC12.27□□□□□ -0.45
CXCL3P19876 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.27□□□□□ -0.45
CXCL3P19876 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.27□□□□□ -0.45
CXCL3P19876 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CXCL3P19876 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CXCL3P19876 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CXCL3P19876 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.27□□□□□ -0.45
CXCL3P19876 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
CXCL3P19876 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CXCL3P19876 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CXCL3P19876 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CXCL3P19876 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 AC011700.1-201ENST00000610409 2627 ntBASIC12.26□□□□□ -0.45
CXCL3P19876 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CXCL3P19876 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.26□□□□□ -0.45
CXCL3P19876 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CXCL3P19876 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CXCL3P19876 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CXCL3P19876 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 AC099522.2-201ENST00000607001 744 ntBASIC12.26□□□□□ -0.45
CXCL3P19876 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CXCL3P19876 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.26□□□□□ -0.45
CXCL3P19876 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 AL121723.1-201ENST00000445194 1519 ntBASIC12.26□□□□□ -0.45
CXCL3P19876 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CXCL3P19876 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CXCL3P19876 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms