Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC17.54■□□□□ 0.4
NCLP19338 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NCLP19338 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.54■□□□□ 0.4
NCLP19338 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCLP19338 AC004066.1-201ENST00000502488 802 ntBASIC17.54■□□□□ 0.4
NCLP19338 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.54■□□□□ 0.4
NCLP19338 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.54■□□□□ 0.4
NCLP19338 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.54■□□□□ 0.4
NCLP19338 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NCLP19338 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.54■□□□□ 0.4
NCLP19338 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.54■□□□□ 0.4
NCLP19338 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 AL035252.4-201ENST00000624174 288 ntBASIC17.54■□□□□ 0.4
NCLP19338 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 AC004461.2-201ENST00000629517 803 ntBASIC17.54■□□□□ 0.4
NCLP19338 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NCLP19338 AC025048.6-201ENST00000634326 1161 ntBASIC17.54■□□□□ 0.4
NCLP19338 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCLP19338 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NCLP19338 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NCLP19338 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
NCLP19338 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.54■□□□□ 0.4
NCLP19338 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC17.54■□□□□ 0.4
NCLP19338 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.54■□□□□ 0.4
NCLP19338 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCLP19338 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 AC018665.1-201ENST00000622927 1362 ntBASIC17.53■□□□□ 0.4
NCLP19338 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NCLP19338 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 AC063926.2-201ENST00000623766 1308 ntBASIC17.53■□□□□ 0.4
NCLP19338 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NCLP19338 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 AC005034.1-201ENST00000426657 489 ntBASIC17.53■□□□□ 0.4
NCLP19338 AC114501.2-201ENST00000439631 535 ntBASIC17.53■□□□□ 0.4
NCLP19338 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.53■□□□□ 0.4
NCLP19338 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.53■□□□□ 0.4
NCLP19338 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.53■□□□□ 0.4
NCLP19338 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 AL358472.5-202ENST00000641448 1267 ntBASIC17.53■□□□□ 0.4
NCLP19338 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 AL354702.1-201ENST00000442006 1960 ntBASIC17.53■□□□□ 0.4
NCLP19338 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCLP19338 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NCLP19338 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NCLP19338 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.52■□□□□ 0.4
NCLP19338 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms