Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VCANP13611 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
VCANP13611 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCANP13611 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.64□□□□□ -0.07
VCANP13611 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
VCANP13611 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VCANP13611 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.64□□□□□ -0.07
VCANP13611 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCANP13611 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC14.64□□□□□ -0.07
VCANP13611 CHCHD2P6-201ENST00000454346 447 ntBASIC14.64□□□□□ -0.07
VCANP13611 GOLGA2P10-201ENST00000550961 817 ntBASIC14.64□□□□□ -0.07
VCANP13611 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.64□□□□□ -0.07
VCANP13611 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VCANP13611 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
VCANP13611 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.63□□□□□ -0.07
VCANP13611 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.63□□□□□ -0.07
VCANP13611 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
VCANP13611 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.63□□□□□ -0.07
VCANP13611 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VCANP13611 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 AL591499.1-201ENST00000307155 1153 ntBASIC14.63□□□□□ -0.07
VCANP13611 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
VCANP13611 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.63□□□□□ -0.07
VCANP13611 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.63□□□□□ -0.07
VCANP13611 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC14.63□□□□□ -0.07
VCANP13611 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 FAM21EP-201ENST00000417804 985 ntBASIC14.63□□□□□ -0.07
VCANP13611 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC14.63□□□□□ -0.07
VCANP13611 AC005777.1-201ENST00000588332 187 ntBASIC14.63□□□□□ -0.07
VCANP13611 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.63□□□□□ -0.07
VCANP13611 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VCANP13611 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.63□□□□□ -0.07
VCANP13611 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.63□□□□□ -0.07
VCANP13611 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VCANP13611 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 RPL30-213ENST00000523172 274 ntTSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
VCANP13611 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.62□□□□□ -0.07
VCANP13611 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VCANP13611 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.62□□□□□ -0.07
VCANP13611 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.62□□□□□ -0.07
VCANP13611 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.62□□□□□ -0.07
VCANP13611 AC138392.1-201ENST00000427577 921 ntBASIC14.62□□□□□ -0.07
VCANP13611 IQCF4-203ENST00000428561 420 ntBASIC14.62□□□□□ -0.07
VCANP13611 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC14.62□□□□□ -0.07
VCANP13611 PRSS3P1-201ENST00000503996 742 ntBASIC14.62□□□□□ -0.07
VCANP13611 AC103724.2-201ENST00000520355 476 ntBASIC14.62□□□□□ -0.07
VCANP13611 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.62□□□□□ -0.07
VCANP13611 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.62□□□□□ -0.07
VCANP13611 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VCANP13611 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.61□□□□□ -0.07
VCANP13611 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.61□□□□□ -0.07
VCANP13611 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC14.61□□□□□ -0.07
VCANP13611 DNM1P46-202ENST00000415963 882 ntBASIC14.61□□□□□ -0.07
VCANP13611 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC14.61□□□□□ -0.07
VCANP13611 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 KRT8P38-201ENST00000441370 1430 ntBASIC14.61□□□□□ -0.07
VCANP13611 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms