Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.59■□□□□ 0.41
APPP05067 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
APPP05067 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.59■□□□□ 0.41
APPP05067 MIR6720-201ENST00000611664 98 ntBASIC17.59■□□□□ 0.41
APPP05067 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
APPP05067 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 AC140479.7-201ENST00000636301 2332 ntBASIC17.59■□□□□ 0.41
APPP05067 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
APPP05067 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.59■□□□□ 0.41
APPP05067 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
APPP05067 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
APPP05067 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
APPP05067 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
APPP05067 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
APPP05067 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
APPP05067 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
APPP05067 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
APPP05067 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
APPP05067 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.58■□□□□ 0.41
APPP05067 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
APPP05067 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
APPP05067 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.58■□□□□ 0.41
APPP05067 LINC00552-201ENST00000625151 2579 ntBASIC17.58■□□□□ 0.41
APPP05067 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
APPP05067 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.58■□□□□ 0.4
APPP05067 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
APPP05067 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
APPP05067 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.58■□□□□ 0.4
APPP05067 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.58■□□□□ 0.4
APPP05067 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.58■□□□□ 0.4
APPP05067 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.58■□□□□ 0.4
APPP05067 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
APPP05067 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.58■□□□□ 0.4
APPP05067 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.58■□□□□ 0.4
APPP05067 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.58■□□□□ 0.4
APPP05067 AL023803.2-201ENST00000620080 638 ntBASIC17.58■□□□□ 0.4
APPP05067 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
APPP05067 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.58■□□□□ 0.4
APPP05067 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
APPP05067 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
APPP05067 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.58■□□□□ 0.4
APPP05067 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
APPP05067 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.58■□□□□ 0.4
APPP05067 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
APPP05067 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
APPP05067 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
APPP05067 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
APPP05067 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.57■□□□□ 0.4
APPP05067 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
APPP05067 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
APPP05067 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
APPP05067 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.57■□□□□ 0.4
APPP05067 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 AGGF1P1-201ENST00000509500 2073 ntBASIC17.57■□□□□ 0.4
APPP05067 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC17.57■□□□□ 0.4
APPP05067 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.57■□□□□ 0.4
APPP05067 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
APPP05067 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
APPP05067 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
APPP05067 AC006033.1-201ENST00000440505 426 ntBASIC17.57■□□□□ 0.4
APPP05067 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APPP05067 TUBB8P8-201ENST00000458717 1058 ntBASIC17.57■□□□□ 0.4
APPP05067 AC126915.1-201ENST00000522847 1038 ntBASIC17.57■□□□□ 0.4
APPP05067 AP001258.2-201ENST00000529891 490 ntBASIC17.57■□□□□ 0.4
APPP05067 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms