Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC087499.5-201ENST00000452760 1342 ntBASIC12.32□□□□□ -0.44
CD74P04233 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.32□□□□□ -0.44
CD74P04233 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CD74P04233 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.32□□□□□ -0.44
CD74P04233 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CD74P04233 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.31□□□□□ -0.44
CD74P04233 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 USP17L6P-201ENST00000382470 1197 ntBASIC12.31□□□□□ -0.44
CD74P04233 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.31□□□□□ -0.44
CD74P04233 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 EIF3FP3-201ENST00000434851 1086 ntBASIC12.31□□□□□ -0.44
CD74P04233 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.31□□□□□ -0.44
CD74P04233 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.31□□□□□ -0.44
CD74P04233 FAM86LP-201ENST00000478302 853 ntBASIC12.31□□□□□ -0.44
CD74P04233 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 AL671883.3-201ENST00000603274 991 ntBASIC12.31□□□□□ -0.44
CD74P04233 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.31□□□□□ -0.44
CD74P04233 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.31□□□□□ -0.44
CD74P04233 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.31□□□□□ -0.44
CD74P04233 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
CD74P04233 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CD74P04233 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD74P04233 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 RN7SKP230-201ENST00000365642 335 ntBASIC12.3□□□□□ -0.44
CD74P04233 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.3□□□□□ -0.44
CD74P04233 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.3□□□□□ -0.44
CD74P04233 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 AC114812.1-204ENST00000449669 728 ntBASIC12.3□□□□□ -0.44
CD74P04233 AC069262.1-201ENST00000539058 672 ntBASIC12.3□□□□□ -0.44
CD74P04233 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.3□□□□□ -0.44
CD74P04233 AL844908.2-201ENST00000609461 460 ntBASIC12.3□□□□□ -0.44
CD74P04233 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.3□□□□□ -0.44
CD74P04233 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD74P04233 AC131902.2-201ENST00000566892 2172 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms