Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RAPGEF3O95398 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RAPGEF3O95398 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPGEF3O95398 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAPGEF3O95398 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 HNRNPA1P10-201ENST00000444945 962 ntBASIC21.24■□□□□ 0.99
RAPGEF3O95398 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 RN7SL440P-201ENST00000577855 343 ntBASIC21.24■□□□□ 0.99
RAPGEF3O95398 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAPGEF3O95398 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAPGEF3O95398 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 HMGA1P2-201ENST00000430198 324 ntBASIC21.23■□□□□ 0.99
RAPGEF3O95398 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 TBC1D3P6-201ENST00000505954 962 ntBASIC21.23■□□□□ 0.99
RAPGEF3O95398 SORD2P-201ENST00000558556 1069 ntBASIC21.23■□□□□ 0.99
RAPGEF3O95398 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 KF455155.1-201ENST00000604493 303 ntBASIC21.23■□□□□ 0.99
RAPGEF3O95398 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPGEF3O95398 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC21.23■□□□□ 0.99
RAPGEF3O95398 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAPGEF3O95398 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPGEF3O95398 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPGEF3O95398 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 CCL19-202ENST00000378800 414 ntTSL 2 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 EEF1DP7-201ENST00000580496 513 ntBASIC21.22■□□□□ 0.99
RAPGEF3O95398 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPGEF3O95398 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPGEF3O95398 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 LINC00554-201ENST00000564841 3011 ntBASIC21.22■□□□□ 0.99
RAPGEF3O95398 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPGEF3O95398 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPGEF3O95398 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RAPGEF3O95398 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms