Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HCN1O60741 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HCN1O60741 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HCN1O60741 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HCN1O60741 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 CICP20-201ENST00000443330 2801 ntBASIC13.76□□□□□ -0.21
HCN1O60741 MIR1908-201ENST00000410394 80 ntBASIC13.76□□□□□ -0.21
HCN1O60741 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.76□□□□□ -0.21
HCN1O60741 PFN1P12-201ENST00000455938 534 ntBASIC13.76□□□□□ -0.21
HCN1O60741 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.76□□□□□ -0.21
HCN1O60741 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 ENPP7P14-201ENST00000621765 1040 ntBASIC13.76□□□□□ -0.21
HCN1O60741 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
HCN1O60741 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HCN1O60741 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 CICP17-201ENST00000418553 2377 ntBASIC13.76□□□□□ -0.21
HCN1O60741 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HCN1O60741 TCAF1P1-201ENST00000414990 2232 ntBASIC13.76□□□□□ -0.21
HCN1O60741 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HCN1O60741 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.76□□□□□ -0.21
HCN1O60741 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
HCN1O60741 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.75□□□□□ -0.21
HCN1O60741 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HCN1O60741 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.75□□□□□ -0.21
HCN1O60741 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HCN1O60741 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.75□□□□□ -0.21
HCN1O60741 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 RN7SL560P-201ENST00000577943 264 ntBASIC13.75□□□□□ -0.21
HCN1O60741 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HCN1O60741 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.75□□□□□ -0.21
HCN1O60741 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.75□□□□□ -0.21
HCN1O60741 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HCN1O60741 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 AL157414.3-201ENST00000624276 1954 ntBASIC13.74□□□□□ -0.21
HCN1O60741 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 AC015802.1-201ENST00000588104 1449 ntBASIC13.74□□□□□ -0.21
HCN1O60741 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.74□□□□□ -0.21
HCN1O60741 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HCN1O60741 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.74□□□□□ -0.21
HCN1O60741 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms