Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.6■□□□□ 0.09
O00370 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
O00370 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
O00370 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
O00370 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
O00370 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
O00370 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
O00370 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
O00370 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
O00370 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
O00370 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
O00370 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
O00370 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.59■□□□□ 0.09
O00370 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.59■□□□□ 0.09
O00370 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.59■□□□□ 0.09
O00370 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.59■□□□□ 0.09
O00370 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.59■□□□□ 0.09
O00370 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
O00370 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 AL033527.4-201ENST00000641026 673 ntBASIC15.59■□□□□ 0.09
O00370 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
O00370 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.59■□□□□ 0.09
O00370 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
O00370 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
O00370 AC009093.10-201ENST00000641956 1442 ntBASIC15.59■□□□□ 0.09
O00370 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.59■□□□□ 0.09
O00370 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
O00370 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
O00370 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.58■□□□□ 0.09
O00370 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.58■□□□□ 0.09
O00370 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
O00370 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
O00370 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
O00370 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
O00370 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.58■□□□□ 0.09
O00370 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
O00370 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.58■□□□□ 0.08
O00370 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
O00370 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
O00370 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.58■□□□□ 0.08
O00370 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.58■□□□□ 0.08
O00370 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.58■□□□□ 0.08
O00370 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.58■□□□□ 0.08
O00370 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.58■□□□□ 0.08
O00370 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.58■□□□□ 0.08
O00370 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.58■□□□□ 0.08
O00370 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.58■□□□□ 0.08
O00370 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.58■□□□□ 0.08
O00370 MIR6752-201ENST00000618442 71 ntBASIC15.58■□□□□ 0.08
O00370 AL162426.1-201ENST00000624141 743 ntBASIC15.58■□□□□ 0.08
O00370 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.58■□□□□ 0.08
O00370 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
O00370 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms