Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 RNA5SP416-201ENST00000516838 111 ntBASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 AC103988.2-201ENST00000561804 725 ntBASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 AL589739.1-201ENST00000607720 493 ntBASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 AC105339.1-204ENST00000636249 355 ntBASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 AC004840.1-201ENST00000636359 365 ntBASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 VENTXP1-201ENST00000569334 2716 ntBASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGB1P1B2RPK0 AC131902.2-201ENST00000566892 2172 ntBASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 ACTG1P14-201ENST00000446382 1122 ntBASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 CETN4P-206ENST00000642099 2168 ntBASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 AC107375.1-201ENST00000564464 2231 ntBASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGB1P1B2RPK0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.84□□□□□ -0.03
HMGB1P1B2RPK0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms