Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC162PA2VCL2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC063926.2-201ENST00000623766 1308 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 HOMER2P2-201ENST00000451621 847 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ACA64.2-201ENST00000459014 129 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC104989.1-201ENST00000519711 778 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC079316.1-201ENST00000548397 411 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC008825.2-201ENST00000603374 718 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 MIR6775-201ENST00000617557 69 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC027601.3-201ENST00000622907 509 ntBASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC162PA2VCL2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AC020910.6-201ENST00000623084 1459 ntBASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AC010141.1-201ENST00000411585 623 ntBASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AC023310.1-201ENST00000554836 735 ntBASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 SHC1P1-201ENST00000425230 1745 ntBASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCDC162PA2VCL2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms