Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RCL1Q9Y2P8 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 MIR193BHG-211ENST00000641433 5365 ntBASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AL645937.2-201ENST00000396808 931 ntBASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AL627223.1-201ENST00000416693 442 ntBASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AL512361.1-201ENST00000554200 418 ntBASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 MIR4453-201ENST00000584019 89 ntBASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AC105339.1-204ENST00000636249 355 ntBASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 KRT8P35-201ENST00000483942 1338 ntBASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RCL1Q9Y2P8 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 SALL4P5-201ENST00000419001 1760 ntBASIC12□□□□□ -0.49
RCL1Q9Y2P8 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 MKNK2P1-201ENST00000437526 628 ntBASIC12□□□□□ -0.49
RCL1Q9Y2P8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12□□□□□ -0.49
RCL1Q9Y2P8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12□□□□□ -0.49
RCL1Q9Y2P8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms