Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ERGIC3Q9Y282 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 AL590627.1-203ENST00000421194 1026 ntBASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 AL079307.3-201ENST00000556114 283 ntBASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 AC007967.4-201ENST00000614700 386 ntBASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 MYADML-201ENST00000474610 2147 ntBASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ERGIC3Q9Y282 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 AC026150.2-201ENST00000564693 1156 ntBASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 BX640515.1-201ENST00000617215 977 ntBASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.41□□□□□ -0.26
ERGIC3Q9Y282 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms