Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 SORD2P-201ENST00000558556 1069 ntBASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 MIR4265-201ENST00000582152 99 ntBASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 AL009176.1-201ENST00000607876 650 ntBASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 MME-218ENST00000625667 363 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 CASP16P-204ENST00000635032 809 ntBASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 CICP6-201ENST00000457191 2729 ntBASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNRF3Q9ULT6 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 KRT8P18-201ENST00000413425 1445 ntBASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 PTGER4P2-201ENST00000328411 252 ntBASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 PTGER4P3-201ENST00000458150 252 ntBASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 AC092862.1-201ENST00000541534 533 ntBASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 AL160191.2-201ENST00000603975 601 ntBASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 LINC00554-201ENST00000564841 3011 ntBASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
ZNRF3Q9ULT6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.22■□□□□ 0.35
ZNRF3Q9ULT6 PRSS3P1-201ENST00000503996 742 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms