Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC074138.1-201ENST00000611182 1303 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL20A1Q9P218 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL20A1Q9P218 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.35■□□□□ 0.21
COL20A1Q9P218 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC090505.1-201ENST00000430515 1834 ntBASIC16.34■□□□□ 0.21
COL20A1Q9P218 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC078991.1-201ENST00000437297 610 ntBASIC16.34■□□□□ 0.21
COL20A1Q9P218 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 MRPL22P1-201ENST00000505398 616 ntBASIC16.34■□□□□ 0.21
COL20A1Q9P218 IQSEC3P1-201ENST00000538799 536 ntBASIC16.34■□□□□ 0.21
COL20A1Q9P218 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC007881.3-201ENST00000608897 607 ntBASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC084781.1-201ENST00000613737 656 ntBASIC16.34■□□□□ 0.21
COL20A1Q9P218 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 AC092978.1-202ENST00000637590 1327 ntBASIC16.34■□□□□ 0.21
COL20A1Q9P218 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL20A1Q9P218 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL20A1Q9P218 MARK2P16-201ENST00000605714 1723 ntBASIC16.33■□□□□ 0.21
COL20A1Q9P218 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL20A1Q9P218 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL20A1Q9P218 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL20A1Q9P218 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 AC067931.2-201ENST00000623655 2003 ntBASIC16.33■□□□□ 0.21
COL20A1Q9P218 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
COL20A1Q9P218 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 RPL17P45-201ENST00000586289 509 ntBASIC16.33■□□□□ 0.2
COL20A1Q9P218 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 U62317.3-201ENST00000608319 855 ntBASIC16.33■□□□□ 0.2
COL20A1Q9P218 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 LINC01815-202ENST00000641468 1409 ntBASIC16.33■□□□□ 0.2
COL20A1Q9P218 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL20A1Q9P218 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
COL20A1Q9P218 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms