Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 PIN1P1-201ENST00000412108 996 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 MEP1AP4-201ENST00000423244 1087 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 NUS1P3-201ENST00000423502 862 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 MYCLP2-201ENST00000449268 967 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 GAPDHP40-201ENST00000505218 1006 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC104596.2-201ENST00000512793 793 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC140912.1-201ENST00000577171 1054 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC093813.1-201ENST00000605066 256 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC093726.1-201ENST00000608064 963 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 AC026410.3-201ENST00000514280 936 ntBASIC12.86□□□□□ -0.35
ELL3Q9HB65 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.86□□□□□ -0.35
ELL3Q9HB65 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ELL3Q9HB65 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms