Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 CNN2P10-201ENST00000443067 918 ntBASIC13.99□□□□□ -0.17
BRF2Q9HAW0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BRF2Q9HAW0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 MIR326-201ENST00000362220 95 ntBASIC13.98□□□□□ -0.17
BRF2Q9HAW0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 HOMER2P2-201ENST00000451621 847 ntBASIC13.98□□□□□ -0.17
BRF2Q9HAW0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
BRF2Q9HAW0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 AC005840.4-201ENST00000541242 2494 ntBASIC13.97□□□□□ -0.17
BRF2Q9HAW0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.97□□□□□ -0.17
BRF2Q9HAW0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms