Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 AC245100.3-201ENST00000441281 285 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 FAM207CP-201ENST00000443486 507 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 MESTP3-201ENST00000503460 968 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 CLUHP6-201ENST00000580789 941 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 AL132655.2-201ENST00000596276 594 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 BX088702.1-201ENST00000610784 235 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 AP001002.3-201ENST00000623482 206 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 KRT8P24-201ENST00000560290 1559 ntBASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 RN7SKP230-201ENST00000365642 335 ntBASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 FO681548.1-201ENST00000455617 1132 ntBASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AC103988.2-201ENST00000561804 725 ntBASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AJ011932.1-201ENST00000621707 465 ntBASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR2J2Q9GZM3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms