Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 AC008534.1-201ENST00000513849 1940 ntTSL 5 BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 KRT17P1-201ENST00000399211 1546 ntBASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 SAMMSON-213ENST00000641336 1521 ntBASIC9.52□□□□□ -0.88
KRTAP3-3Q9BYR6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 OR4K15-201ENST00000305051 1216 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 B3GALNT1P1-201ENST00000420569 975 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 SUCLA2-AS1-201ENST00000423869 552 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 NIPA2P1-201ENST00000426223 976 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 APTR-203ENST00000430801 583 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CYP2T1P-201ENST00000432607 1285 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 ZNF815P-204ENST00000434898 1737 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 WDR82P2-201ENST00000444540 928 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AL022318.1-201ENST00000450216 678 ntTSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 HNRNPA1P47-201ENST00000453073 931 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC021660.1-201ENST00000465006 554 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 TFP1-202ENST00000475455 1573 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CMC2-202ENST00000486645 766 ntTSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 RPL12P7-201ENST00000493832 494 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 HMGB1P44-201ENST00000508597 572 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC093809.1-201ENST00000509155 340 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 MYL6-206ENST00000547408 683 ntTSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CRADD-210ENST00000552033 622 ntTSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CMC2-223ENST00000570195 871 ntTSL 3 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 SEPT7P9-203ENST00000604116 343 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 BID-214ENST00000617586 542 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AL731566.2-201ENST00000618971 317 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC007529.2-201ENST00000637435 1094 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 AC135050.7-201ENST00000624508 2218 ntBASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
KRTAP3-3Q9BYR6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms