Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 AC006987.1-201ENST00000413610 527 ntBASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 AC006529.1-201ENST00000459978 637 ntBASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 KRT8P2-201ENST00000556193 944 ntBASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 AP001527.2-201ENST00000614441 631 ntBASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 FUCA1P1-201ENST00000374476 1351 ntBASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 RN7SL788P-201ENST00000460504 316 ntBASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 AC104506.1-201ENST00000609247 429 ntBASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 AC104640.1-201ENST00000562617 2109 ntBASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.44■□□□□ 0.38
RTFDC1Q9BY42 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 RN7SL582P-201ENST00000491078 279 ntBASIC17.43■□□□□ 0.38
RTFDC1Q9BY42 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms