Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AL162390.1-201ENST00000622201 1246 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC004777.1-201ENST00000624317 287 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC097520.1-201ENST00000624435 385 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 OR2I1P-210ENST00000642037 4691 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC087481.3-201ENST00000602886 1894 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.31□□□□□ -0.28
USB1Q9BQ65 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USB1Q9BQ65 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USB1Q9BQ65 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.3□□□□□ -0.28
USB1Q9BQ65 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USB1Q9BQ65 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.29□□□□□ -0.28
USB1Q9BQ65 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms