Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 TCAF1P1-201ENST00000414990 2232 ntBASIC13.05□□□□□ -0.32
VRK1Q99986 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
VRK1Q99986 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 FAM86MP-201ENST00000340703 885 ntBASIC13.05□□□□□ -0.32
VRK1Q99986 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.05□□□□□ -0.32
VRK1Q99986 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.05□□□□□ -0.32
VRK1Q99986 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.05□□□□□ -0.32
VRK1Q99986 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
VRK1Q99986 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 AC023310.1-201ENST00000554836 735 ntBASIC13.05□□□□□ -0.32
VRK1Q99986 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.05□□□□□ -0.32
VRK1Q99986 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.05□□□□□ -0.32
VRK1Q99986 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 AC138951.2-201ENST00000623455 1161 ntBASIC13.05□□□□□ -0.32
VRK1Q99986 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VRK1Q99986 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.05□□□□□ -0.32
VRK1Q99986 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VRK1Q99986 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 AC026954.1-201ENST00000429771 1293 ntBASIC13.04□□□□□ -0.32
VRK1Q99986 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VRK1Q99986 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.04□□□□□ -0.32
VRK1Q99986 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.04□□□□□ -0.32
VRK1Q99986 RNA5SP412-201ENST00000516234 123 ntBASIC13.04□□□□□ -0.32
VRK1Q99986 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.04□□□□□ -0.32
VRK1Q99986 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.04□□□□□ -0.32
VRK1Q99986 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.04□□□□□ -0.32
VRK1Q99986 AL583810.1-201ENST00000553344 1045 ntBASIC13.04□□□□□ -0.32
VRK1Q99986 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VRK1Q99986 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VRK1Q99986 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms