Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RN7SL480P-201ENST00000581481 294 ntBASIC12.42□□□□□ -0.42
COL12A1Q99715 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC12.42□□□□□ -0.42
COL12A1Q99715 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC12.42□□□□□ -0.42
COL12A1Q99715 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC12.42□□□□□ -0.42
COL12A1Q99715 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC12.42□□□□□ -0.42
COL12A1Q99715 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
COL12A1Q99715 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.42□□□□□ -0.42
COL12A1Q99715 AC112693.3-201ENST00000624819 1983 ntBASIC12.42□□□□□ -0.42
COL12A1Q99715 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
COL12A1Q99715 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.42□□□□□ -0.42
COL12A1Q99715 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.42□□□□□ -0.42
COL12A1Q99715 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL12A1Q99715 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL12A1Q99715 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL12A1Q99715 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.42□□□□□ -0.42
COL12A1Q99715 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.42□□□□□ -0.42
COL12A1Q99715 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
COL12A1Q99715 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL12A1Q99715 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL12A1Q99715 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 MIR193A-201ENST00000384882 88 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 KLF17P1-201ENST00000547105 1126 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 URAHP-205ENST00000610227 398 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
COL12A1Q99715 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.41□□□□□ -0.42
COL12A1Q99715 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.41□□□□□ -0.42
COL12A1Q99715 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.41□□□□□ -0.42
COL12A1Q99715 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 AC136621.1-201ENST00000624017 2304 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
COL12A1Q99715 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 ALMS1P1-201ENST00000428767 921 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 AC004910.1-201ENST00000433493 787 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 ZNF877P-201ENST00000437614 612 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 ABCD1P3-201ENST00000562927 605 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC12.41□□□□□ -0.42
COL12A1Q99715 AL136982.5-201ENST00000605222 294 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 AL359091.4-201ENST00000610052 409 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.41□□□□□ -0.42
COL12A1Q99715 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 AL121753.2-201ENST00000624581 1461 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
COL12A1Q99715 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
COL12A1Q99715 PPP1R2P10-201ENST00000393023 595 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 ST13P19-201ENST00000442505 1124 ntBASIC12.41□□□□□ -0.42
COL12A1Q99715 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC12.41□□□□□ -0.42
COL12A1Q99715 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.41□□□□□ -0.42
COL12A1Q99715 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
COL12A1Q99715 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
COL12A1Q99715 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COL12A1Q99715 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.4□□□□□ -0.42
COL12A1Q99715 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.4□□□□□ -0.42
COL12A1Q99715 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 OR7E12P-201ENST00000344740 973 ntBASIC12.4□□□□□ -0.42
COL12A1Q99715 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.4□□□□□ -0.42
COL12A1Q99715 AC009517.1-201ENST00000454750 570 ntBASIC12.4□□□□□ -0.42
COL12A1Q99715 RN7SL684P-201ENST00000465665 294 ntBASIC12.4□□□□□ -0.42
COL12A1Q99715 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.4□□□□□ -0.42
COL12A1Q99715 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.4□□□□□ -0.42
COL12A1Q99715 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COL12A1Q99715 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.4□□□□□ -0.42
COL12A1Q99715 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
COL12A1Q99715 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms