Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 ARSEP1-201ENST00000420443 635 ntBASIC11.44□□□□□ -0.58
TRGV9Q99603 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.44□□□□□ -0.58
TRGV9Q99603 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.44□□□□□ -0.58
TRGV9Q99603 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.44□□□□□ -0.58
TRGV9Q99603 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.44□□□□□ -0.58
TRGV9Q99603 AC027237.1-201ENST00000560942 655 ntBASIC11.44□□□□□ -0.58
TRGV9Q99603 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.44□□□□□ -0.58
TRGV9Q99603 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.44□□□□□ -0.58
TRGV9Q99603 AC005498.2-205ENST00000593218 784 ntBASIC11.44□□□□□ -0.58
TRGV9Q99603 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.44□□□□□ -0.58
TRGV9Q99603 ENPP7P14-201ENST00000621765 1040 ntBASIC11.44□□□□□ -0.58
TRGV9Q99603 CU634019.7-201ENST00000624153 1185 ntBASIC11.44□□□□□ -0.58
TRGV9Q99603 FP236241.2-201ENST00000624906 1185 ntBASIC11.44□□□□□ -0.58
TRGV9Q99603 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TRGV9Q99603 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 PTENP1-202ENST00000532280 3996 ntBASIC11.44□□□□□ -0.58
TRGV9Q99603 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
TRGV9Q99603 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV9Q99603 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV9Q99603 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 TCAF1P1-201ENST00000414990 2232 ntBASIC11.43□□□□□ -0.58
TRGV9Q99603 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.43□□□□□ -0.58
TRGV9Q99603 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.43□□□□□ -0.58
TRGV9Q99603 RN7SL48P-201ENST00000579283 293 ntBASIC11.43□□□□□ -0.58
TRGV9Q99603 AL132655.2-201ENST00000596276 594 ntBASIC11.43□□□□□ -0.58
TRGV9Q99603 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
TRGV9Q99603 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
TRGV9Q99603 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TRGV9Q99603 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.43□□□□□ -0.58
TRGV9Q99603 AP000593.2-201ENST00000542775 1433 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms