Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 OR8T1P-201ENST00000421347 918 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AL954722.1-201ENST00000431238 259 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 URB1-AS1-201ENST00000534991 831 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 RN7SL69P-201ENST00000468423 272 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC011431.1-201ENST00000512971 230 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 ABCC6P2-201ENST00000526069 590 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 VENTXP3-201ENST00000546480 773 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC138627.1-201ENST00000641127 1257 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ISL1-203ENST00000511384 981 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AP001267.2-201ENST00000532619 2086 ntBASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SALL4P5-201ENST00000419001 1760 ntBASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 RN7SL523P-201ENST00000484401 298 ntBASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CSMD1Q96PZ7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 RN7SL375P-201ENST00000492442 298 ntBASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
CSMD1Q96PZ7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms