Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC85AQ96PX6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC046158.3-201ENST00000624947 2558 ntBASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC026316.1-201ENST00000398900 414 ntBASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 RN7SL181P-201ENST00000462921 277 ntBASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 RN7SL277P-201ENST00000481521 288 ntBASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC85AQ96PX6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AL354702.1-201ENST00000442006 1960 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AHCYP4-201ENST00000419201 1315 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AL512430.1-201ENST00000392575 860 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 BANF1P3-201ENST00000412556 261 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 NOC2LP1-201ENST00000450578 752 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 LDHBP1-201ENST00000455730 1119 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AP000358.1-201ENST00000456260 156 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AC008267.1-201ENST00000474858 1069 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 MIR3188-201ENST00000583494 85 ntBASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC85AQ96PX6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AC104640.1-201ENST00000562617 2109 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms