Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 AC020910.5-201ENST00000623668 1865 ntBASIC17.12■□□□□ 0.33
TRIM47Q96LD4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 AC012441.2-201ENST00000444843 739 ntBASIC17.12■□□□□ 0.33
TRIM47Q96LD4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 AL109837.1-201ENST00000603272 613 ntBASIC17.12■□□□□ 0.33
TRIM47Q96LD4 AC007881.3-201ENST00000608897 607 ntBASIC17.12■□□□□ 0.33
TRIM47Q96LD4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 FAM90A2P-201ENST00000511144 1395 ntBASIC17.12■□□□□ 0.33
TRIM47Q96LD4 FAM90A25P-201ENST00000528404 1395 ntBASIC17.12■□□□□ 0.33
TRIM47Q96LD4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM47Q96LD4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 AC011840.2-201ENST00000563063 1520 ntBASIC17.11■□□□□ 0.33
TRIM47Q96LD4 AL157414.3-201ENST00000624276 1954 ntBASIC17.11■□□□□ 0.33
TRIM47Q96LD4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 IGHV3-37-201ENST00000518544 340 ntBASIC17.11■□□□□ 0.33
TRIM47Q96LD4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 AC141586.1-203ENST00000567242 366 ntBASIC17.11■□□□□ 0.33
TRIM47Q96LD4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 MEG3_2.1-201ENST00000611456 105 ntBASIC17.11■□□□□ 0.33
TRIM47Q96LD4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 KRT8P21-201ENST00000430398 1491 ntBASIC17.11■□□□□ 0.33
TRIM47Q96LD4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM47Q96LD4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM47Q96LD4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms