Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHAMP1Q96JM3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHAMP1Q96JM3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHAMP1Q96JM3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CHAMP1Q96JM3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CHAMP1Q96JM3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHAMP1Q96JM3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 MIR661-201ENST00000384842 89 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 ACTBP8-201ENST00000403258 1108 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 SPTLC1P1-201ENST00000447199 261 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AL512638.1-201ENST00000457493 794 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 WASH4P-201ENST00000564273 1246 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 LINC02560-201ENST00000596379 459 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AC138696.2-201ENST00000607376 223 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHAMP1Q96JM3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 AC126755.1-201ENST00000525846 6405 ntBASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 POM121L8P-201ENST00000417732 1281 ntBASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 TLE1P1-201ENST00000422965 589 ntBASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 POM121L9P-203ENST00000441984 1285 ntBASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 RPL13AP25-201ENST00000484130 612 ntBASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 SERBP1P5-201ENST00000510079 1181 ntBASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.97■□□□□ 0.31
CHAMP1Q96JM3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms