Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 RAB43P1-201ENST00000561790 589 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AC008825.2-201ENST00000603374 718 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AC027601.5-201ENST00000624065 2482 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 RN7SL832P-201ENST00000607781 1756 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 KRT8P28-201ENST00000433288 1390 ntBASIC15.1■□□□□ 0.01
HDAC11Q96DB2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDAC11Q96DB2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.09■□□□□ 0.01
HDAC11Q96DB2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AC010141.1-201ENST00000411585 623 ntBASIC15.09■□□□□ 0.01
HDAC11Q96DB2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 CTBP2P5-201ENST00000454986 1264 ntBASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PPY2P-201ENST00000582808 702 ntBASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AC008687.7-202ENST00000637404 953 ntBASIC15.09■□□□□ 0.01
HDAC11Q96DB2 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.09■□□□□ 0.01
HDAC11Q96DB2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 KRT8P4-201ENST00000509735 1454 ntBASIC15.08■□□□□ 0.01
HDAC11Q96DB2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HDAC11Q96DB2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.08■□□□□ 0
HDAC11Q96DB2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.08■□□□□ 0
HDAC11Q96DB2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HDAC11Q96DB2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HDAC11Q96DB2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HDAC11Q96DB2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
HDAC11Q96DB2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.08■□□□□ 0
HDAC11Q96DB2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
HDAC11Q96DB2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HDAC11Q96DB2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.08■□□□□ 0
HDAC11Q96DB2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.08■□□□□ 0
HDAC11Q96DB2 AC026954.1-201ENST00000429771 1293 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms