Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
TMEM54Q969K7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.83□□□□□ -0.35
TMEM54Q969K7 AC067750.1-201ENST00000608826 6545 ntBASIC12.83□□□□□ -0.35
TMEM54Q969K7 KRT8P29-201ENST00000420409 1371 ntBASIC12.83□□□□□ -0.36
TMEM54Q969K7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 KRT8P24-201ENST00000560290 1559 ntBASIC12.83□□□□□ -0.36
TMEM54Q969K7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.83□□□□□ -0.36
TMEM54Q969K7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 AC005324.6-201ENST00000587972 613 ntBASIC12.83□□□□□ -0.36
TMEM54Q969K7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.83□□□□□ -0.36
TMEM54Q969K7 AC133540.1-201ENST00000620845 1019 ntBASIC12.83□□□□□ -0.36
TMEM54Q969K7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 AL022313.4-201ENST00000562756 2046 ntBASIC12.83□□□□□ -0.36
TMEM54Q969K7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TMEM54Q969K7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
TMEM54Q969K7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 CYP4F23P-201ENST00000593402 1579 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AC117489.1-201ENST00000625169 3217 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AL591846.1-201ENST00000451736 433 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AC021723.1-201ENST00000486306 515 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AC003686.1-201ENST00000550956 1034 ntBASIC12.82□□□□□ -0.36
TMEM54Q969K7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.82□□□□□ -0.36
TMEM54Q969K7 AC124068.2-201ENST00000569473 1109 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms