Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 OR51A9P-201ENST00000422578 911 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC023141.7-201ENST00000430646 407 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC026470.1-201ENST00000478038 846 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 RN7SL277P-201ENST00000481521 288 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC093826.1-201ENST00000508655 993 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 RNA5SP406-201ENST00000516106 112 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 GOLGA2P7-209ENST00000560408 745 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC021016.3-201ENST00000608367 477 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AL118522.1-201ENST00000611368 560 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC009145.4-201ENST00000625119 1294 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC023090.2-201ENST00000625182 2110 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 AC006372.4-201ENST00000624122 1543 ntBASIC16.45■□□□□ 0.22
SH3TC2Q8TF17 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 HLA-DPA2-205ENST00000433582 733 ntBASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 RN7SL582P-201ENST00000491078 279 ntBASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AC106047.2-201ENST00000511723 743 ntBASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AC131206.1-201ENST00000538078 1211 ntBASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SH3TC2Q8TF17 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3TC2Q8TF17 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.43■□□□□ 0.22
SH3TC2Q8TF17 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SH3TC2Q8TF17 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SH3TC2Q8TF17 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3TC2Q8TF17 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SH3TC2Q8TF17 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms