Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC004554.1-201ENST00000422830 1468 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AL451000.1-201ENST00000451300 1186 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 GRPEL2P1-201ENST00000453145 339 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC090136.2-201ENST00000517809 420 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC023968.2-201ENST00000560593 1049 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC145285.5-201ENST00000562217 361 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AL009176.1-201ENST00000607876 650 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 AC018442.1-201ENST00000421439 2061 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 KRT8P43-201ENST00000406052 1458 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 OR10N1P-201ENST00000392758 869 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 AC006987.1-201ENST00000413610 527 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 PSAT1P2-201ENST00000426107 972 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 STK24P1-201ENST00000455035 1291 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 PRSS3P1-201ENST00000503996 742 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 VENTXP3-201ENST00000546480 773 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 MIR4265-201ENST00000582152 99 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 AL136982.5-201ENST00000605222 294 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.37■□□□□ 0.37
SNED1Q8TER0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.37■□□□□ 0.37
SNED1Q8TER0 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNED1Q8TER0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms