Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMARCC2Q8TAQ2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 TMEM198B-204ENST00000484016 896 ntBASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 MIR6869-201ENST00000619434 62 ntBASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMARCC2Q8TAQ2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 AL358472.3-201ENST00000608147 415 ntBASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.09■□□□□ 0.33
SMARCC2Q8TAQ2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms