Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIMC1Q8NDZ2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AGGF1P1-201ENST00000509500 2073 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC092135.3-201ENST00000624151 1846 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC004945.1-201ENST00000416738 983 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 COX5BP1-201ENST00000507622 393 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 AC012617.1-204ENST00000586340 2305 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 KRT8P4-201ENST00000509735 1454 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIMC1Q8NDZ2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 AC234783.1-201ENST00000441761 496 ntBASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 AC022210.1-201ENST00000449856 793 ntBASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 KLF2P4-201ENST00000451959 1225 ntBASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 AL606495.2-201ENST00000605867 535 ntBASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 RHOXF1P1-202ENST00000635473 501 ntBASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms