Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 LAP3P2-201ENST00000454686 1454 ntBASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ARHGEF39Q8N4T4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AC092580.1-201ENST00000433998 658 ntBASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 CHMP4BP1-201ENST00000556017 588 ntBASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 MIR3188-201ENST00000583494 85 ntBASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AF254983.2-201ENST00000612331 135 ntBASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AC138627.1-207ENST00000641560 1006 ntBASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ARHGEF39Q8N4T4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.71□□□□□ -0.22
ARHGEF39Q8N4T4 AC012617.1-204ENST00000586340 2305 ntBASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 AC239868.1-201ENST00000369385 493 ntBASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 AL161670.2-201ENST00000557650 1227 ntBASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.7□□□□□ -0.22
ARHGEF39Q8N4T4 RN7SL574P-201ENST00000581512 297 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms