Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 TBC1D27-202ENST00000424239 1573 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 RPL13AP3-202ENST00000494676 1473 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 AC007952.5-201ENST00000572818 1486 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.82■□□□□ 0.28
USP50Q70EL3 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 ACTBP14-201ENST00000411655 1089 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 AC136604.1-202ENST00000425471 771 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.82■□□□□ 0.28
USP50Q70EL3 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.82■□□□□ 0.28
USP50Q70EL3 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 AC079414.2-201ENST00000567157 1104 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.82■□□□□ 0.28
USP50Q70EL3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.82■□□□□ 0.28
USP50Q70EL3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP50Q70EL3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
USP50Q70EL3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP50Q70EL3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP50Q70EL3 TMBIM7P-203ENST00000641617 1718 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 AC011270.2-201ENST00000624293 2550 ntBASIC16.82■□□□□ 0.28
USP50Q70EL3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USP50Q70EL3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
USP50Q70EL3 KRT8P43-201ENST00000406052 1458 ntBASIC16.81■□□□□ 0.28
USP50Q70EL3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
USP50Q70EL3 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.81■□□□□ 0.28
USP50Q70EL3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USP50Q70EL3 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC16.81■□□□□ 0.28
USP50Q70EL3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.81■□□□□ 0.28
USP50Q70EL3 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.81■□□□□ 0.28
USP50Q70EL3 AC010900.1-201ENST00000449849 1296 ntBASIC16.81■□□□□ 0.28
USP50Q70EL3 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.81■□□□□ 0.28
USP50Q70EL3 RN7SL351P-201ENST00000469306 248 ntBASIC16.81■□□□□ 0.28
USP50Q70EL3 CTBP2P6-201ENST00000526402 1229 ntBASIC16.81■□□□□ 0.28
USP50Q70EL3 AC126755.5-201ENST00000622756 267 ntBASIC16.81■□□□□ 0.28
USP50Q70EL3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
USP50Q70EL3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
USP50Q70EL3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
USP50Q70EL3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.81■□□□□ 0.28
USP50Q70EL3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.81■□□□□ 0.28
USP50Q70EL3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP50Q70EL3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.8■□□□□ 0.28
USP50Q70EL3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
USP50Q70EL3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
USP50Q70EL3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.8■□□□□ 0.28
USP50Q70EL3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.8■□□□□ 0.28
USP50Q70EL3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
USP50Q70EL3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
USP50Q70EL3 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP50Q70EL3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.8■□□□□ 0.28
USP50Q70EL3 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.8■□□□□ 0.28
USP50Q70EL3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.8■□□□□ 0.28
USP50Q70EL3 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.8■□□□□ 0.28
USP50Q70EL3 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC16.8■□□□□ 0.28
USP50Q70EL3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.8■□□□□ 0.28
USP50Q70EL3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms