Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 AC253536.4-201ENST00000440539 267 ntBASIC15.41■□□□□ 0.06
RNF43Q68DV7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 HIST2H2BC-201ENST00000498492 580 ntBASIC15.41■□□□□ 0.06
RNF43Q68DV7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF43Q68DV7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF43Q68DV7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 TLE1P1-201ENST00000422965 589 ntBASIC15.4■□□□□ 0.06
RNF43Q68DV7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 HIST2H2BB-201ENST00000449108 381 ntBASIC15.4■□□□□ 0.06
RNF43Q68DV7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 RN7SL769P-201ENST00000469386 295 ntBASIC15.4■□□□□ 0.06
RNF43Q68DV7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 AC244157.2-201ENST00000616239 1006 ntBASIC15.4■□□□□ 0.06
RNF43Q68DV7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 CICP20-201ENST00000443330 2801 ntBASIC15.4■□□□□ 0.06
RNF43Q68DV7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 FKBP4P6-201ENST00000457486 1332 ntBASIC15.4■□□□□ 0.06
RNF43Q68DV7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 AC023090.2-201ENST00000625182 2110 ntBASIC15.4■□□□□ 0.06
RNF43Q68DV7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF43Q68DV7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF43Q68DV7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 TCAF1P1-201ENST00000414990 2232 ntBASIC15.39■□□□□ 0.05
RNF43Q68DV7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 ALG3P1-201ENST00000508806 1114 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms