Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 AC090953.1-201ENST00000604305 1092 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 AP003419.4-201ENST00000616071 517 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 AP000720.1-201ENST00000625091 483 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 HLA-C-210ENST00000640219 976 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VARS2Q5ST30 LINC01165-201ENST00000445190 1623 ntBASIC15.52■□□□□ 0.08
VARS2Q5ST30 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.52■□□□□ 0.08
VARS2Q5ST30 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
VARS2Q5ST30 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
VARS2Q5ST30 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.52■□□□□ 0.07
VARS2Q5ST30 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.52■□□□□ 0.07
VARS2Q5ST30 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
VARS2Q5ST30 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.52■□□□□ 0.07
VARS2Q5ST30 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VARS2Q5ST30 TBC1D3J-201ENST00000620719 1426 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 NORAD-201ENST00000565493 5339 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 TSPY25P-201ENST00000429463 745 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 PGAM1P5-201ENST00000548011 764 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 MTND1P8-201ENST00000571424 950 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 MIR3188-201ENST00000583494 85 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 AL109837.1-201ENST00000603272 613 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 AP003108.4-201ENST00000623917 878 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 AC068620.4-201ENST00000636730 1182 ntBASIC15.51■□□□□ 0.07
VARS2Q5ST30 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.51■□□□□ 0.07
VARS2Q5ST30 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VARS2Q5ST30 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VARS2Q5ST30 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
VARS2Q5ST30 AC015909.3-201ENST00000572855 1794 ntBASIC15.5■□□□□ 0.07
VARS2Q5ST30 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms