Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC61A1P61619 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC61A1P61619 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC61A1P61619 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.93□□□□□ -0.34
SEC61A1P61619 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
SEC61A1P61619 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.93□□□□□ -0.34
SEC61A1P61619 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SEC61A1P61619 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SEC61A1P61619 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC61A1P61619 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 AC083964.2-201ENST00000623988 2396 ntBASIC12.92□□□□□ -0.34
SEC61A1P61619 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 ARSEP1-201ENST00000420443 635 ntBASIC12.92□□□□□ -0.34
SEC61A1P61619 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.92□□□□□ -0.34
SEC61A1P61619 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.92□□□□□ -0.34
SEC61A1P61619 RPL13AP25-201ENST00000484130 612 ntBASIC12.92□□□□□ -0.34
SEC61A1P61619 IGHV3-71-201ENST00000523324 359 ntBASIC12.92□□□□□ -0.34
SEC61A1P61619 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.92□□□□□ -0.34
SEC61A1P61619 TDH-203ENST00000531764 1110 ntBASIC12.92□□□□□ -0.34
SEC61A1P61619 KRT17P8-201ENST00000540749 863 ntBASIC12.92□□□□□ -0.34
SEC61A1P61619 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SEC61A1P61619 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.92□□□□□ -0.34
SEC61A1P61619 MIR5189-201ENST00000577370 114 ntBASIC12.92□□□□□ -0.34
SEC61A1P61619 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC61A1P61619 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
SEC61A1P61619 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC61A1P61619 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 MSTO2P-201ENST00000314835 1709 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SEC61A1P61619 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
SEC61A1P61619 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.91□□□□□ -0.34
SEC61A1P61619 AP000845.1-201ENST00000581677 2131 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SEC61A1P61619 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 DRD5P1-201ENST00000456605 1438 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.91□□□□□ -0.34
SEC61A1P61619 ATP5G2P4-201ENST00000442175 420 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.91□□□□□ -0.34
SEC61A1P61619 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 CROCCP4-201ENST00000457096 498 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms