Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.34□□□□□ -0.27
HMGA2P52926 AL928654.5-201ENST00000624831 2501 ntBASIC13.34□□□□□ -0.27
HMGA2P52926 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HMGA2P52926 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGA2P52926 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.33□□□□□ -0.27
HMGA2P52926 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.33□□□□□ -0.27
HMGA2P52926 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
HMGA2P52926 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
HMGA2P52926 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HMGA2P52926 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGA2P52926 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HMGA2P52926 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HMGA2P52926 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
HMGA2P52926 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGA2P52926 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.33□□□□□ -0.28
HMGA2P52926 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGA2P52926 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.33□□□□□ -0.28
HMGA2P52926 AL162726.2-201ENST00000438986 1017 ntBASIC13.33□□□□□ -0.28
HMGA2P52926 AK2P2-201ENST00000439142 405 ntBASIC13.33□□□□□ -0.28
HMGA2P52926 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGA2P52926 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
HMGA2P52926 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 AL138709.1-201ENST00000614840 1693 ntBASIC13.33□□□□□ -0.28
HMGA2P52926 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGA2P52926 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGA2P52926 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGA2P52926 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.33□□□□□ -0.28
HMGA2P52926 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HMGA2P52926 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 AC009474.1-201ENST00000455096 1565 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 AC087499.6-201ENST00000411576 835 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.32□□□□□ -0.28
HMGA2P52926 AL035414.1-201ENST00000451327 857 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms