Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.02■□□□□ 0.16
CPT1AP50416 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CPT1AP50416 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.02■□□□□ 0.16
CPT1AP50416 IL9RP3-201ENST00000442856 1674 ntBASIC16.02■□□□□ 0.16
CPT1AP50416 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.02■□□□□ 0.16
CPT1AP50416 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CPT1AP50416 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.02■□□□□ 0.16
CPT1AP50416 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CPT1AP50416 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CPT1AP50416 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CPT1AP50416 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CPT1AP50416 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
CPT1AP50416 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.02■□□□□ 0.16
CPT1AP50416 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CPT1AP50416 AL161932.2-201ENST00000435436 679 ntBASIC16.02■□□□□ 0.16
CPT1AP50416 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.02■□□□□ 0.16
CPT1AP50416 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.02■□□□□ 0.16
CPT1AP50416 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.02■□□□□ 0.16
CPT1AP50416 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CPT1AP50416 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.02■□□□□ 0.15
CPT1AP50416 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPT1AP50416 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.02■□□□□ 0.15
CPT1AP50416 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.02■□□□□ 0.15
CPT1AP50416 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPT1AP50416 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPT1AP50416 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.02■□□□□ 0.15
CPT1AP50416 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPT1AP50416 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CPT1AP50416 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPT1AP50416 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPT1AP50416 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPT1AP50416 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 MYADML-201ENST00000474610 2147 ntBASIC16.01■□□□□ 0.15
CPT1AP50416 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.01■□□□□ 0.15
CPT1AP50416 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.01■□□□□ 0.15
CPT1AP50416 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.01■□□□□ 0.15
CPT1AP50416 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.01■□□□□ 0.15
CPT1AP50416 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.01■□□□□ 0.15
CPT1AP50416 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPT1AP50416 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 PYY2-201ENST00000315776 282 ntBASIC16.01■□□□□ 0.15
CPT1AP50416 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPT1AP50416 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPT1AP50416 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.01■□□□□ 0.15
CPT1AP50416 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.01■□□□□ 0.15
CPT1AP50416 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPT1AP50416 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.01■□□□□ 0.15
CPT1AP50416 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 ALG1L6P-201ENST00000515248 758 ntBASIC16.01■□□□□ 0.15
CPT1AP50416 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.01■□□□□ 0.15
CPT1AP50416 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPT1AP50416 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.01■□□□□ 0.15
CPT1AP50416 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.01■□□□□ 0.15
CPT1AP50416 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.01■□□□□ 0.15
CPT1AP50416 AL133467.4-201ENST00000602953 725 ntBASIC16.01■□□□□ 0.15
CPT1AP50416 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 AC007250.1-201ENST00000608934 338 ntBASIC16.01■□□□□ 0.15
CPT1AP50416 LINC00528-201ENST00000600723 2160 ntBASIC16.01■□□□□ 0.15
CPT1AP50416 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPT1AP50416 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPT1AP50416 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CPT1AP50416 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CPT1AP50416 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms