Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.79□□□□□ -0.2
GABRA4P48169 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.79□□□□□ -0.2
GABRA4P48169 AC140479.7-201ENST00000636301 2332 ntBASIC13.79□□□□□ -0.2
GABRA4P48169 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
GABRA4P48169 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 AC007274.2-201ENST00000421675 662 ntBASIC13.79□□□□□ -0.2
GABRA4P48169 AC092580.1-201ENST00000433998 658 ntBASIC13.79□□□□□ -0.2
GABRA4P48169 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.79□□□□□ -0.2
GABRA4P48169 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.79□□□□□ -0.2
GABRA4P48169 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.79□□□□□ -0.2
GABRA4P48169 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.79□□□□□ -0.2
GABRA4P48169 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
GABRA4P48169 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
GABRA4P48169 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GABRA4P48169 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.78□□□□□ -0.2
GABRA4P48169 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
GABRA4P48169 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 RNA5SP359-201ENST00000364838 113 ntBASIC13.78□□□□□ -0.2
GABRA4P48169 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.78□□□□□ -0.2
GABRA4P48169 POU5F1P2-201ENST00000521750 823 ntBASIC13.78□□□□□ -0.2
GABRA4P48169 AC134698.3-201ENST00000523880 214 ntBASIC13.78□□□□□ -0.2
GABRA4P48169 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
GABRA4P48169 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 AL133499.1-201ENST00000596207 608 ntBASIC13.78□□□□□ -0.2
GABRA4P48169 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.78□□□□□ -0.2
GABRA4P48169 AL022334.2-201ENST00000610000 484 ntBASIC13.78□□□□□ -0.2
GABRA4P48169 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 FRMPD2B-201ENST00000431305 1347 ntBASIC13.78□□□□□ -0.2
GABRA4P48169 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.78□□□□□ -0.2
GABRA4P48169 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.78□□□□□ -0.2
GABRA4P48169 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
GABRA4P48169 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.78□□□□□ -0.2
GABRA4P48169 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GABRA4P48169 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.78□□□□□ -0.2
GABRA4P48169 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.78□□□□□ -0.2
GABRA4P48169 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms