Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.18□□□□□ -0.3
ATRXP46100 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.18□□□□□ -0.3
ATRXP46100 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC13.18□□□□□ -0.3
ATRXP46100 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC13.18□□□□□ -0.3
ATRXP46100 PRMT1P1-201ENST00000604252 1009 ntBASIC13.18□□□□□ -0.3
ATRXP46100 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC13.18□□□□□ -0.3
ATRXP46100 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ATRXP46100 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.18□□□□□ -0.3
ATRXP46100 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 AC131212.3-201ENST00000624087 4219 ntBASIC13.18□□□□□ -0.3
ATRXP46100 AC006372.4-201ENST00000624122 1543 ntBASIC13.18□□□□□ -0.3
ATRXP46100 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ATRXP46100 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATRXP46100 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.17□□□□□ -0.3
ATRXP46100 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.17□□□□□ -0.3
ATRXP46100 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.17□□□□□ -0.3
ATRXP46100 MIR339-201ENST00000362153 94 ntBASIC13.17□□□□□ -0.3
ATRXP46100 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.17□□□□□ -0.3
ATRXP46100 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.17□□□□□ -0.3
ATRXP46100 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.17□□□□□ -0.3
ATRXP46100 RN7SL33P-201ENST00000462543 342 ntBASIC13.17□□□□□ -0.3
ATRXP46100 AACSP1-202ENST00000521412 1095 ntBASIC13.17□□□□□ -0.3
ATRXP46100 METTL7AP1-201ENST00000547343 496 ntBASIC13.17□□□□□ -0.3
ATRXP46100 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.17□□□□□ -0.3
ATRXP46100 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.17□□□□□ -0.3
ATRXP46100 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 PMM2-216ENST00000569958 698 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.17□□□□□ -0.3
ATRXP46100 PCDHA12-202ENST00000613593 2588 ntBASIC13.17□□□□□ -0.3
ATRXP46100 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 AC022532.1-201ENST00000624563 1728 ntBASIC13.17□□□□□ -0.3
ATRXP46100 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
ATRXP46100 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 ASS1P1-201ENST00000402854 1237 ntBASIC13.17□□□□□ -0.3
ATRXP46100 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC13.17□□□□□ -0.3
ATRXP46100 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 AC120498.7-201ENST00000562876 330 ntBASIC13.17□□□□□ -0.3
ATRXP46100 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.17□□□□□ -0.3
ATRXP46100 RN7SL665P-201ENST00000578793 300 ntBASIC13.17□□□□□ -0.3
ATRXP46100 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.17□□□□□ -0.3
ATRXP46100 FAM223B-202ENST00000598177 713 ntBASIC13.17□□□□□ -0.3
ATRXP46100 FAM223A-202ENST00000625204 713 ntBASIC13.17□□□□□ -0.3
ATRXP46100 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.17□□□□□ -0.3
ATRXP46100 AC090616.6-203ENST00000579186 1945 ntBASIC13.17□□□□□ -0.3
ATRXP46100 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 CROCCP1-201ENST00000426910 5675 ntBASIC13.17□□□□□ -0.3
ATRXP46100 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATRXP46100 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ATRXP46100 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATRXP46100 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATRXP46100 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATRXP46100 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ATRXP46100 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATRXP46100 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATRXP46100 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms